Cluster: SPMP72_bin.44_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_03413
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_125225 | opera_contig_125225_70 | 56557 | 57354 | - | 2.A.98.1.4 |
| TC | opera_contig_125225 | opera_contig_125225_71 | 57431 | 57580 | - | 2.A.98.1.4 |
| pfam | opera_contig_125225 | opera_contig_125225_72 | 57694 | 57987 | - | ParE_toxin |
| pfam | opera_contig_125225 | opera_contig_125225_73 | 57980 | 58291 | - | RelB |
| CAZyme | opera_contig_125225 | opera_contig_125225_74 | 58503 | 59336 | + | GT2 |
Gene ID: opera_contig_125225_70
Type: TC
Location: 56557 - 57354 (-)
Type: TC
Location: 56557 - 57354 (-)
Gene ID: opera_contig_125225_71
Type: TC
Location: 57431 - 57580 (-)
Type: TC
Location: 57431 - 57580 (-)
Gene ID: opera_contig_125225_72
Type: pfam
Location: 57694 - 57987 (-)
Type: pfam
Location: 57694 - 57987 (-)
Gene ID: opera_contig_125225_73
Type: pfam
Location: 57980 - 58291 (-)
Type: pfam
Location: 57980 - 58291 (-)
Gene ID: opera_contig_125225_74
Type: CAZyme
Location: 58503 - 59336 (+)
Type: CAZyme
Location: 58503 - 59336 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125225_70 | vegan > omnivore | 1.96695 | 0.00191 |
| opera_contig_125225_70 | vegetarian > omnivore | 2.81733 | 0.03451 |
| opera_contig_125225_71 | vegan > omnivore | 20.48342 | 0.00191 |