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Cluster: SPMP72_bin.44_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_125220 opera_contig_125220_94 86009 86854 - 9.B.34.1.3
NULL(UNKNOWN) opera_contig_125220 opera_contig_125220_95 87054 87617 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_125220 opera_contig_125220_96 87711 90362 - GT51
peptidase opera_contig_125220 opera_contig_125220_97 90471 92090 - X52.001
CAZyme opera_contig_125220 opera_contig_125220_98 92148 92705 - GT51
pfam opera_contig_125220 opera_contig_125220_99 92702 93289 - RecU
pfam opera_contig_125220 opera_contig_125220_100 93427 93762 + DivIVA
TC opera_contig_125220 opera_contig_125220_101 94178 95581 + 2.A.38.4.3
TC opera_contig_125220 opera_contig_125220_102 95586 96245 + 2.A.38.4.4
pfam opera_contig_125220 opera_contig_125220_103 96254 96745 + TetR_C_8
pfam opera_contig_125220 opera_contig_125220_104 96961 97542 + SDF
TC opera_contig_125220 opera_contig_125220_105 97710 98231 + 2.A.23.1.5
TC opera_contig_125220 opera_contig_125220_106 98334 99509 + 2.A.53.3.9
STP opera_contig_125220 opera_contig_125220_107 99485 99973 + STAS
TC opera_contig_125220 opera_contig_125220_108 100101 101438 + 2.A.66.1.26
TC opera_contig_125220 opera_contig_125220_109 101660 102949 + 9.A.40.2.4
Gene ID: opera_contig_125220_94
Type: TC
Location: 86009 - 86854 (-)
Gene ID: opera_contig_125220_95
Type:
Location: 87054 - 87617 (-)
Gene ID: opera_contig_125220_96
Type: CAZyme
Location: 87711 - 90362 (-)
Gene ID: opera_contig_125220_97
Type: peptidase
Location: 90471 - 92090 (-)
Gene ID: opera_contig_125220_98
Type: CAZyme
Location: 92148 - 92705 (-)
Gene ID: opera_contig_125220_99
Type: pfam
Location: 92702 - 93289 (-)
Gene ID: opera_contig_125220_100
Type: pfam
Location: 93427 - 93762 (+)
Gene ID: opera_contig_125220_101
Type: TC
Location: 94178 - 95581 (+)
Gene ID: opera_contig_125220_102
Type: TC
Location: 95586 - 96245 (+)
Gene ID: opera_contig_125220_103
Type: pfam
Location: 96254 - 96745 (+)
Gene ID: opera_contig_125220_104
Type: pfam
Location: 96961 - 97542 (+)
Gene ID: opera_contig_125220_105
Type: TC
Location: 97710 - 98231 (+)
Gene ID: opera_contig_125220_106
Type: TC
Location: 98334 - 99509 (+)
Gene ID: opera_contig_125220_107
Type: STP
Location: 99485 - 99973 (+)
Gene ID: opera_contig_125220_108
Type: TC
Location: 100101 - 101438 (+)
Gene ID: opera_contig_125220_109
Type: TC
Location: 101660 - 102949 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_125220_99 vegan > omnivore 1.47671 0.00191
opera_contig_125220_102 vegan > omnivore 2.54616 0.00191
opera_contig_125220_103 vegan > omnivore 2.26052 0.00191
opera_contig_125220_107 vegan > omnivore 1.86903 0.00191
opera_contig_125220_109 vegan > omnivore 1.26862 0.00191
opera_contig_125220_109 vegetarian > omnivore 2.90647 0.04327

🧭 Explore Read Mapping of CGC

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