Cluster: SPMP72_bin.44_CGC18
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_11315
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_125219 | opera_contig_125219_120 | 97678 | 98475 | + | 4.A.6.1.10 |
| TC | opera_contig_125219 | opera_contig_125219_121 | 99553 | 100545 | + | 4.A.6.1.15 |
| TC | opera_contig_125219 | opera_contig_125219_122 | 100558 | 101373 | + | 4.A.6.1.15 |
| TC | opera_contig_125219 | opera_contig_125219_123 | 101394 | 102311 | + | 4.A.6.1.15 |
| pfam | opera_contig_125219 | opera_contig_125219_124 | 102344 | 103192 | + | DUF956 |
| TC | opera_contig_125219 | opera_contig_125219_125 | 103261 | 104595 | + | 2.A.66.1.37 |
| NULL(UNKNOWN) | opera_contig_125219 | opera_contig_125219_126 | 104619 | 104891 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | opera_contig_125219 | opera_contig_125219_127 | 104891 | 105499 | - | HTH_3 |
| CAZyme | opera_contig_125219 | opera_contig_125219_128 | 105653 | 107131 | + | GH1 |
Gene ID: opera_contig_125219_120
Type: TC
Location: 97678 - 98475 (+)
Type: TC
Location: 97678 - 98475 (+)
Gene ID: opera_contig_125219_121
Type: TC
Location: 99553 - 100545 (+)
Type: TC
Location: 99553 - 100545 (+)
Gene ID: opera_contig_125219_122
Type: TC
Location: 100558 - 101373 (+)
Type: TC
Location: 100558 - 101373 (+)
Gene ID: opera_contig_125219_123
Type: TC
Location: 101394 - 102311 (+)
Type: TC
Location: 101394 - 102311 (+)
Gene ID: opera_contig_125219_124
Type: pfam
Location: 102344 - 103192 (+)
Type: pfam
Location: 102344 - 103192 (+)
Gene ID: opera_contig_125219_125
Type: TC
Location: 103261 - 104595 (+)
Type: TC
Location: 103261 - 104595 (+)
Gene ID: opera_contig_125219_126
Type:
Location: 104619 - 104891 (-)
Type:
Location: 104619 - 104891 (-)
Gene ID: opera_contig_125219_127
Type: TF
Location: 104891 - 105499 (-)
Type: TF
Location: 104891 - 105499 (-)
Gene ID: opera_contig_125219_128
Type: CAZyme
Location: 105653 - 107131 (+)
Type: CAZyme
Location: 105653 - 107131 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125219_120 | vegan > omnivore | 1.58178 | 0.00191 |