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Cluster: SPMP72_bin.44_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_125219 opera_contig_125219_120 97678 98475 + 4.A.6.1.10
TC opera_contig_125219 opera_contig_125219_121 99553 100545 + 4.A.6.1.15
TC opera_contig_125219 opera_contig_125219_122 100558 101373 + 4.A.6.1.15
TC opera_contig_125219 opera_contig_125219_123 101394 102311 + 4.A.6.1.15
pfam opera_contig_125219 opera_contig_125219_124 102344 103192 + DUF956
TC opera_contig_125219 opera_contig_125219_125 103261 104595 + 2.A.66.1.37
NULL(UNKNOWN) opera_contig_125219 opera_contig_125219_126 104619 104891 - NULL(UNKNOWN)
[View Structural Homologs]
TF opera_contig_125219 opera_contig_125219_127 104891 105499 - HTH_3
CAZyme opera_contig_125219 opera_contig_125219_128 105653 107131 + GH1
Gene ID: opera_contig_125219_120
Type: TC
Location: 97678 - 98475 (+)
Gene ID: opera_contig_125219_121
Type: TC
Location: 99553 - 100545 (+)
Gene ID: opera_contig_125219_122
Type: TC
Location: 100558 - 101373 (+)
Gene ID: opera_contig_125219_123
Type: TC
Location: 101394 - 102311 (+)
Gene ID: opera_contig_125219_124
Type: pfam
Location: 102344 - 103192 (+)
Gene ID: opera_contig_125219_125
Type: TC
Location: 103261 - 104595 (+)
Gene ID: opera_contig_125219_126
Type:
Location: 104619 - 104891 (-)
Gene ID: opera_contig_125219_127
Type: TF
Location: 104891 - 105499 (-)
Gene ID: opera_contig_125219_128
Type: CAZyme
Location: 105653 - 107131 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_125219_120 vegan > omnivore 1.58178 0.00191

🧭 Explore Read Mapping of CGC

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