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Cluster: SPMP72_bin.44_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_125219 opera_contig_125219_87 64180 64854 - 3.A.1.125.2
pfam opera_contig_125219 opera_contig_125219_88 64856 66295 - FtsX | MacB_PCD
TC opera_contig_125219 opera_contig_125219_89 66429 68177 + 9.A.8.1.6
TC opera_contig_125219 opera_contig_125219_90 68243 68767 + 9.A.8.1.9
NULL(UNKNOWN) opera_contig_125219 opera_contig_125219_91 68797 69402 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_125219 opera_contig_125219_92 69462 70967 - GH1
TC opera_contig_125219 opera_contig_125219_93 70978 72291 - 4.A.3.2.6
Gene ID: opera_contig_125219_87
Type: TC
Location: 64180 - 64854 (-)
Gene ID: opera_contig_125219_88
Type: pfam
Location: 64856 - 66295 (-)
Gene ID: opera_contig_125219_89
Type: TC
Location: 66429 - 68177 (+)
Gene ID: opera_contig_125219_90
Type: TC
Location: 68243 - 68767 (+)
Gene ID: opera_contig_125219_91
Type:
Location: 68797 - 69402 (-)
Gene ID: opera_contig_125219_92
Type: CAZyme
Location: 69462 - 70967 (-)
Gene ID: opera_contig_125219_93
Type: TC
Location: 70978 - 72291 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_125219_87 vegan > omnivore 1.97933 0.00191
opera_contig_125219_90 vegan > omnivore 2.23718 0.00191

🧭 Explore Read Mapping of CGC

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