Cluster: SPMP72_bin.44_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_01024
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_125219 | opera_contig_125219_87 | 64180 | 64854 | - | 3.A.1.125.2 |
| pfam | opera_contig_125219 | opera_contig_125219_88 | 64856 | 66295 | - | FtsX | MacB_PCD |
| TC | opera_contig_125219 | opera_contig_125219_89 | 66429 | 68177 | + | 9.A.8.1.6 |
| TC | opera_contig_125219 | opera_contig_125219_90 | 68243 | 68767 | + | 9.A.8.1.9 |
| NULL(UNKNOWN) | opera_contig_125219 | opera_contig_125219_91 | 68797 | 69402 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_125219 | opera_contig_125219_92 | 69462 | 70967 | - | GH1 |
| TC | opera_contig_125219 | opera_contig_125219_93 | 70978 | 72291 | - | 4.A.3.2.6 |
Gene ID: opera_contig_125219_87
Type: TC
Location: 64180 - 64854 (-)
Type: TC
Location: 64180 - 64854 (-)
Gene ID: opera_contig_125219_88
Type: pfam
Location: 64856 - 66295 (-)
Type: pfam
Location: 64856 - 66295 (-)
Gene ID: opera_contig_125219_89
Type: TC
Location: 66429 - 68177 (+)
Type: TC
Location: 66429 - 68177 (+)
Gene ID: opera_contig_125219_90
Type: TC
Location: 68243 - 68767 (+)
Type: TC
Location: 68243 - 68767 (+)
Gene ID: opera_contig_125219_91
Type:
Location: 68797 - 69402 (-)
Type:
Location: 68797 - 69402 (-)
Gene ID: opera_contig_125219_92
Type: CAZyme
Location: 69462 - 70967 (-)
Type: CAZyme
Location: 69462 - 70967 (-)
Gene ID: opera_contig_125219_93
Type: TC
Location: 70978 - 72291 (-)
Type: TC
Location: 70978 - 72291 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125219_87 | vegan > omnivore | 1.97933 | 0.00191 |
| opera_contig_125219_90 | vegan > omnivore | 2.23718 | 0.00191 |