Cluster: SPMP72_bin.44_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_02354
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_125217 | opera_contig_125217_214 | 207206 | 208186 | - | 8.A.5.1.4 |
| pfam | opera_contig_125217 | opera_contig_125217_215 | 208191 | 209030 | - | adh_short | KR | adh_short_C2 |
| TF | opera_contig_125217 | opera_contig_125217_216 | 209147 | 210004 | + | HTH_1 |
| CAZyme | opera_contig_125217 | opera_contig_125217_217 | 210027 | 211511 | - | GH1 |
Gene ID: opera_contig_125217_214
Type: TC
Location: 207206 - 208186 (-)
Type: TC
Location: 207206 - 208186 (-)
Gene ID: opera_contig_125217_215
Type: pfam
Location: 208191 - 209030 (-)
Type: pfam
Location: 208191 - 209030 (-)
Gene ID: opera_contig_125217_216
Type: TF
Location: 209147 - 210004 (+)
Type: TF
Location: 209147 - 210004 (+)
Gene ID: opera_contig_125217_217
Type: CAZyme
Location: 210027 - 211511 (-)
Type: CAZyme
Location: 210027 - 211511 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125217_215 | vegan > omnivore | 2.36401 | 0.00191 |
| opera_contig_125217_216 | vegan > omnivore | 1.03846 | 0.00191 |