Cluster: SPMP72_bin.44_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_04899
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_125216 | opera_contig_125216_66 | 55519 | 56151 | + | 1.A.34.1.1 |
| TC | opera_contig_125216 | opera_contig_125216_67 | 56276 | 56923 | + | 9.B.157.1.1 |
| TC | opera_contig_125216 | opera_contig_125216_68 | 57044 | 57265 | + | 9.B.157.1.2 |
| pfam | opera_contig_125216 | opera_contig_125216_69 | 57352 | 58125 | + | Hydrolase | S6PP | Hydrolase_3 |
| CAZyme | opera_contig_125216 | opera_contig_125216_70 | 58163 | 59311 | - | GH170 |
| TC | opera_contig_125216 | opera_contig_125216_71 | 59447 | 61102 | + | 9.B.146.1.1 |
Gene ID: opera_contig_125216_66
Type: TC
Location: 55519 - 56151 (+)
Type: TC
Location: 55519 - 56151 (+)
Gene ID: opera_contig_125216_67
Type: TC
Location: 56276 - 56923 (+)
Type: TC
Location: 56276 - 56923 (+)
Gene ID: opera_contig_125216_68
Type: TC
Location: 57044 - 57265 (+)
Type: TC
Location: 57044 - 57265 (+)
Gene ID: opera_contig_125216_69
Type: pfam
Location: 57352 - 58125 (+)
Type: pfam
Location: 57352 - 58125 (+)
Gene ID: opera_contig_125216_70
Type: CAZyme
Location: 58163 - 59311 (-)
Type: CAZyme
Location: 58163 - 59311 (-)
Gene ID: opera_contig_125216_71
Type: TC
Location: 59447 - 61102 (+)
Type: TC
Location: 59447 - 61102 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_125216_66 | vegan > omnivore | 1.16342 | 0.00191 |
| opera_contig_125216_70 | vegan > omnivore | 3.03118 | 0.00191 |
| opera_contig_125216_70 | vegetarian > omnivore | 2.87167 | 0.03451 |
| opera_contig_125216_71 | vegan > omnivore | 3.02690 | 0.00191 |