dbCAN Logo

Cluster: SPMP72_bin.44_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_125216 opera_contig_125216_66 55519 56151 + 1.A.34.1.1
TC opera_contig_125216 opera_contig_125216_67 56276 56923 + 9.B.157.1.1
TC opera_contig_125216 opera_contig_125216_68 57044 57265 + 9.B.157.1.2
pfam opera_contig_125216 opera_contig_125216_69 57352 58125 + Hydrolase | S6PP | Hydrolase_3
CAZyme opera_contig_125216 opera_contig_125216_70 58163 59311 - GH170
TC opera_contig_125216 opera_contig_125216_71 59447 61102 + 9.B.146.1.1
Gene ID: opera_contig_125216_66
Type: TC
Location: 55519 - 56151 (+)
Gene ID: opera_contig_125216_67
Type: TC
Location: 56276 - 56923 (+)
Gene ID: opera_contig_125216_68
Type: TC
Location: 57044 - 57265 (+)
Gene ID: opera_contig_125216_69
Type: pfam
Location: 57352 - 58125 (+)
Gene ID: opera_contig_125216_70
Type: CAZyme
Location: 58163 - 59311 (-)
Gene ID: opera_contig_125216_71
Type: TC
Location: 59447 - 61102 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_125216_66 vegan > omnivore 1.16342 0.00191
opera_contig_125216_70 vegan > omnivore 3.03118 0.00191
opera_contig_125216_70 vegetarian > omnivore 2.87167 0.03451
opera_contig_125216_71 vegan > omnivore 3.02690 0.00191

🧭 Explore Read Mapping of CGC

← Back to Cluster List