Cluster: SPMP72_bin.44_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: SPMP72_bin.44
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_125215 | opera_contig_125215_275 | 260476 | 263043 | + | 3.A.9.1.2 |
| TF | opera_contig_125215 | opera_contig_125215_276 | 263114 | 265045 | - | HTH_11 | Mga |
| NULL(UNKNOWN) | opera_contig_125215 | opera_contig_125215_277 | 265138 | 266070 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | opera_contig_125215 | opera_contig_125215_278 | 266281 | 266598 | + | 4.A.3.2.3 |
| TC | opera_contig_125215 | opera_contig_125215_279 | 266592 | 266906 | + | 4.A.3.2.3 |
| TC | opera_contig_125215 | opera_contig_125215_280 | 266926 | 268110 | + | 4.A.3.2.2 |
| CAZyme | opera_contig_125215 | opera_contig_125215_281 | 268225 | 269664 | + | GH1 |
Gene ID: opera_contig_125215_275
Type: TC
Location: 260476 - 263043 (+)
Type: TC
Location: 260476 - 263043 (+)
Gene ID: opera_contig_125215_276
Type: TF
Location: 263114 - 265045 (-)
Type: TF
Location: 263114 - 265045 (-)
Gene ID: opera_contig_125215_277
Type:
Location: 265138 - 266070 (-)
Type:
Location: 265138 - 266070 (-)
Gene ID: opera_contig_125215_278
Type: TC
Location: 266281 - 266598 (+)
Type: TC
Location: 266281 - 266598 (+)
Gene ID: opera_contig_125215_279
Type: TC
Location: 266592 - 266906 (+)
Type: TC
Location: 266592 - 266906 (+)
Gene ID: opera_contig_125215_280
Type: TC
Location: 266926 - 268110 (+)
Type: TC
Location: 266926 - 268110 (+)
Gene ID: opera_contig_125215_281
Type: CAZyme
Location: 268225 - 269664 (+)
Type: CAZyme
Location: 268225 - 269664 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Faecalibacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.