Cluster: SPMP71_bin.54_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP71_bin.54
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_50 | opera_contig_50_51 | 64874 | 66202 | + | GT28 |
| pfam | opera_contig_50 | opera_contig_50_52 | 66473 | 66850 | + | 4HBT |
| TC | opera_contig_50 | opera_contig_50_53 | 67131 | 69992 | + | 3.D.1.4.2 |
| TC | opera_contig_50 | opera_contig_50_54 | 70003 | 70449 | + | 3.D.1.4.2 |
| pfam | opera_contig_50 | opera_contig_50_55 | 70454 | 71119 | + | Complex1_30kDa |
| TC | opera_contig_50 | opera_contig_50_56 | 71121 | 72209 | + | 3.D.1.4.2 |
| TC | opera_contig_50 | opera_contig_50_57 | 72216 | 72680 | + | 3.D.1.4.2 |
Gene ID: opera_contig_50_51
Type: CAZyme
Location: 64874 - 66202 (+)
Type: CAZyme
Location: 64874 - 66202 (+)
Gene ID: opera_contig_50_52
Type: pfam
Location: 66473 - 66850 (+)
Type: pfam
Location: 66473 - 66850 (+)
Gene ID: opera_contig_50_53
Type: TC
Location: 67131 - 69992 (+)
Type: TC
Location: 67131 - 69992 (+)
Gene ID: opera_contig_50_54
Type: TC
Location: 70003 - 70449 (+)
Type: TC
Location: 70003 - 70449 (+)
Gene ID: opera_contig_50_55
Type: pfam
Location: 70454 - 71119 (+)
Type: pfam
Location: 70454 - 71119 (+)
Gene ID: opera_contig_50_56
Type: TC
Location: 71121 - 72209 (+)
Type: TC
Location: 71121 - 72209 (+)
Gene ID: opera_contig_50_57
Type: TC
Location: 72216 - 72680 (+)
Type: TC
Location: 72216 - 72680 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_50_54 | vegan > omnivore | 1.39223 | 0.02677 |