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Cluster: SPMP71_bin.54_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_50 opera_contig_50_4 2966 5500 + 5.A.3.3.3
TC opera_contig_50 opera_contig_50_5 5512 6081 + 5.A.3.11.1
pfam opera_contig_50 opera_contig_50_6 6097 6891 + DmsC
TC opera_contig_50 opera_contig_50_7 7165 9012 - 3.A.1.103.1
TC opera_contig_50 opera_contig_50_8 9022 9804 - 3.A.1.103.6
CAZyme opera_contig_50 opera_contig_50_9 9986 12088 + GT2
CAZyme opera_contig_50 opera_contig_50_10 12142 13134 - GT2
CAZyme opera_contig_50 opera_contig_50_11 13302 14285 + GT2
pfam opera_contig_50 opera_contig_50_12 14331 16421 + DUF6541
CAZyme opera_contig_50 opera_contig_50_13 16534 17658 - GT4
Gene ID: opera_contig_50_4
Type: TC
Location: 2966 - 5500 (+)
Gene ID: opera_contig_50_5
Type: TC
Location: 5512 - 6081 (+)
Gene ID: opera_contig_50_6
Type: pfam
Location: 6097 - 6891 (+)
Gene ID: opera_contig_50_7
Type: TC
Location: 7165 - 9012 (-)
Gene ID: opera_contig_50_8
Type: TC
Location: 9022 - 9804 (-)
Gene ID: opera_contig_50_9
Type: CAZyme
Location: 9986 - 12088 (+)
Gene ID: opera_contig_50_10
Type: CAZyme
Location: 12142 - 13134 (-)
Gene ID: opera_contig_50_11
Type: CAZyme
Location: 13302 - 14285 (+)
Gene ID: opera_contig_50_12
Type: pfam
Location: 14331 - 16421 (+)
Gene ID: opera_contig_50_13
Type: CAZyme
Location: 16534 - 17658 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Actinomycetota
→
Class
Coriobacteriia
→
Order
Coriobacteriales
→
Family
Eggerthellaceae
→
Genus
Slackia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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