Cluster: SPMP71_bin.54_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP71_bin.54
- CGC Family ID: CGCFAM_00272
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_45 | opera_contig_45_20 | 18437 | 20848 | + | GH3 |
| pfam | opera_contig_45 | opera_contig_45_21 | 21027 | 23186 | + | Helicase_C | UVR | ResIII | UvrB | UvrB_inter |
| TC | opera_contig_45 | opera_contig_45_22 | 23673 | 25040 | + | 2.A.1.21.1 |
| TC | opera_contig_45 | opera_contig_45_23 | 25137 | 25859 | + | 9.B.120.1.3 |
| TC | opera_contig_45 | opera_contig_45_24 | 26046 | 26609 | + | 2.A.107.1.2 |
Gene ID: opera_contig_45_20
Type: CAZyme
Location: 18437 - 20848 (+)
Type: CAZyme
Location: 18437 - 20848 (+)
Gene ID: opera_contig_45_21
Type: pfam
Location: 21027 - 23186 (+)
Type: pfam
Location: 21027 - 23186 (+)
Gene ID: opera_contig_45_22
Type: TC
Location: 23673 - 25040 (+)
Type: TC
Location: 23673 - 25040 (+)
Gene ID: opera_contig_45_23
Type: TC
Location: 25137 - 25859 (+)
Type: TC
Location: 25137 - 25859 (+)
Gene ID: opera_contig_45_24
Type: TC
Location: 26046 - 26609 (+)
Type: TC
Location: 26046 - 26609 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Slackia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.