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Cluster: SPMP65_bin.15_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_12 opera_contig_12_18 23282 25672 + CBM48 | GH13_9
peptidase opera_contig_12 opera_contig_12_19 26373 27707 + M20.UND
TC opera_contig_12 opera_contig_12_20 27712 28785 + 3.A.1.11.1
TC opera_contig_12 opera_contig_12_21 28787 29641 + 3.A.1.11.1
TC opera_contig_12 opera_contig_12_22 29638 30414 + 3.A.1.11.1
TC opera_contig_12 opera_contig_12_23 30440 31483 + 3.A.1.11.8
TC opera_contig_12 opera_contig_12_24 31483 32298 + 3.A.1.11.1
TC opera_contig_12 opera_contig_12_25 32310 34154 + 3.A.1.11.7
TC opera_contig_12 opera_contig_12_26 34244 35278 + 3.A.1.11.1
TC opera_contig_12 opera_contig_12_27 35288 36916 + 8.A.7.1.1
Gene ID: opera_contig_12_18
Type: CAZyme
Location: 23282 - 25672 (+)
Gene ID: opera_contig_12_19
Type: peptidase
Location: 26373 - 27707 (+)
Gene ID: opera_contig_12_20
Type: TC
Location: 27712 - 28785 (+)
Gene ID: opera_contig_12_21
Type: TC
Location: 28787 - 29641 (+)
Gene ID: opera_contig_12_22
Type: TC
Location: 29638 - 30414 (+)
Gene ID: opera_contig_12_23
Type: TC
Location: 30440 - 31483 (+)
Gene ID: opera_contig_12_24
Type: TC
Location: 31483 - 32298 (+)
Gene ID: opera_contig_12_25
Type: TC
Location: 32310 - 34154 (+)
Gene ID: opera_contig_12_26
Type: TC
Location: 34244 - 35278 (+)
Gene ID: opera_contig_12_27
Type: TC
Location: 35288 - 36916 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_12_21 vegan > omnivore 1.20716 0.01794

🧭 Explore Read Mapping of CGC

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