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Cluster: SPMP65_bin.15_CGC43

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_110140 opera_contig_110140_59 71092 72552 + 3.A.1.1.27
TC opera_contig_110140 opera_contig_110140_60 72552 73406 + 3.A.1.1.27
pfam opera_contig_110140 opera_contig_110140_61 73411 74187 + TraX
CAZyme opera_contig_110140 opera_contig_110140_62 74227 76251 + GH42
Gene ID: opera_contig_110140_59
Type: TC
Location: 71092 - 72552 (+)
Gene ID: opera_contig_110140_60
Type: TC
Location: 72552 - 73406 (+)
Gene ID: opera_contig_110140_61
Type: pfam
Location: 73411 - 74187 (+)
Gene ID: opera_contig_110140_62
Type: CAZyme
Location: 74227 - 76251 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_110140_60 vegan > omnivore 1.39926 0.01794
opera_contig_110140_61 vegan > omnivore 1.29246 0.01794

🧭 Explore Read Mapping of CGC

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