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Cluster: SPMP65_bin.15_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_110138 opera_contig_110138_37 39997 40917 - GT2
pfam opera_contig_110138 opera_contig_110138_38 41009 42451 - LytR_cpsA_psr
TC opera_contig_110138 opera_contig_110138_39 42467 43870 - 9.B.18.1.1
CAZyme opera_contig_110138 opera_contig_110138_40 43979 44935 - GT2
CAZyme opera_contig_110138 opera_contig_110138_41 44928 46814 - GT2 | GT2
peptidase opera_contig_110138 opera_contig_110138_42 47034 48314 + S11.UPW
pfam opera_contig_110138 opera_contig_110138_43 48481 50964 - YfhO | YfhO | YfhO
CAZyme opera_contig_110138 opera_contig_110138_44 50975 53419 - GT2 | GT2
CAZyme opera_contig_110138 opera_contig_110138_45 53412 55934 - GT2 | GT2
pfam opera_contig_110138 opera_contig_110138_46 55988 58198 - Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25
TC opera_contig_110138 opera_contig_110138_47 58201 59472 - 3.A.1.103.6
TC opera_contig_110138 opera_contig_110138_48 59553 60368 - 3.A.1.104.1
pfam opera_contig_110138 opera_contig_110138_49 60381 60935 - dTDP_sugar_isom
STP opera_contig_110138 opera_contig_110138_50 61052 62182 - Aminotran_1_2
CAZyme opera_contig_110138 opera_contig_110138_51 62175 63128 - GT2
TC opera_contig_110138 opera_contig_110138_52 63157 63501 - 2.A.7.33.5
Gene ID: opera_contig_110138_37
Type: CAZyme
Location: 39997 - 40917 (-)
Gene ID: opera_contig_110138_38
Type: pfam
Location: 41009 - 42451 (-)
Gene ID: opera_contig_110138_39
Type: TC
Location: 42467 - 43870 (-)
Gene ID: opera_contig_110138_40
Type: CAZyme
Location: 43979 - 44935 (-)
Gene ID: opera_contig_110138_41
Type: CAZyme
Location: 44928 - 46814 (-)
Gene ID: opera_contig_110138_42
Type: peptidase
Location: 47034 - 48314 (+)
Gene ID: opera_contig_110138_43
Type: pfam
Location: 48481 - 50964 (-)
Gene ID: opera_contig_110138_44
Type: CAZyme
Location: 50975 - 53419 (-)
Gene ID: opera_contig_110138_45
Type: CAZyme
Location: 53412 - 55934 (-)
Gene ID: opera_contig_110138_46
Type: pfam
Location: 55988 - 58198 (-)
Gene ID: opera_contig_110138_47
Type: TC
Location: 58201 - 59472 (-)
Gene ID: opera_contig_110138_48
Type: TC
Location: 59553 - 60368 (-)
Gene ID: opera_contig_110138_49
Type: pfam
Location: 60381 - 60935 (-)
Gene ID: opera_contig_110138_50
Type: STP
Location: 61052 - 62182 (-)
Gene ID: opera_contig_110138_51
Type: CAZyme
Location: 62175 - 63128 (-)
Gene ID: opera_contig_110138_52
Type: TC
Location: 63157 - 63501 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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