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Cluster: SPMP65_bin.15_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_110137 opera_contig_110137_56 61963 62895 + 2.A.69.4.5
pfam opera_contig_110137 opera_contig_110137_57 62934 63476 + Lysine_decarbox | LDcluster4
pfam opera_contig_110137 opera_contig_110137_58 63910 64545 - Aldolase
TC opera_contig_110137 opera_contig_110137_59 64680 65339 - 1.A.62.2.1
TF opera_contig_110137 opera_contig_110137_60 65413 66432 - LacI
CAZyme opera_contig_110137 opera_contig_110137_61 66818 69253 + GH94
Gene ID: opera_contig_110137_56
Type: TC
Location: 61963 - 62895 (+)
Gene ID: opera_contig_110137_57
Type: pfam
Location: 62934 - 63476 (+)
Gene ID: opera_contig_110137_58
Type: pfam
Location: 63910 - 64545 (-)
Gene ID: opera_contig_110137_59
Type: TC
Location: 64680 - 65339 (-)
Gene ID: opera_contig_110137_60
Type: TF
Location: 65413 - 66432 (-)
Gene ID: opera_contig_110137_61
Type: CAZyme
Location: 66818 - 69253 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_110137_60 vegan > omnivore 1.81264 0.01794

🧭 Explore Read Mapping of CGC

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