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Cluster: SPMP65_bin.15_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_110136 opera_contig_110136_275 298148 299161 + GT2
pfam opera_contig_110136 opera_contig_110136_276 299283 299972 - PAP2_3
TF opera_contig_110136 opera_contig_110136_277 300408 301079 + Trans_reg_C
TC opera_contig_110136 opera_contig_110136_278 301174 303378 + 3.A.7.7.1
Gene ID: opera_contig_110136_275
Type: CAZyme
Location: 298148 - 299161 (+)
Gene ID: opera_contig_110136_276
Type: pfam
Location: 299283 - 299972 (-)
Gene ID: opera_contig_110136_277
Type: TF
Location: 300408 - 301079 (+)
Gene ID: opera_contig_110136_278
Type: TC
Location: 301174 - 303378 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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