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Cluster: SPMP65_bin.15_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_10 opera_contig_10_37 32822 33514 - 2.A.122.1.4
TC opera_contig_10 opera_contig_10_38 33511 33879 - 1.E.14.1.17
NULL(UNKNOWN) opera_contig_10 opera_contig_10_39 33899 34366 - NULL(UNKNOWN)
[View Structural Homologs]
pfam opera_contig_10 opera_contig_10_40 34627 35568 - PMI_typeI_cat | MPI_cupin_dom
CAZyme opera_contig_10 opera_contig_10_41 35721 38573 - GH130_1
Gene ID: opera_contig_10_37
Type: TC
Location: 32822 - 33514 (-)
Gene ID: opera_contig_10_38
Type: TC
Location: 33511 - 33879 (-)
Gene ID: opera_contig_10_39
Type:
Location: 33899 - 34366 (-)
Gene ID: opera_contig_10_40
Type: pfam
Location: 34627 - 35568 (-)
Gene ID: opera_contig_10_41
Type: CAZyme
Location: 35721 - 38573 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_10_38 vegan > omnivore 1.00706 0.01794

🧭 Explore Read Mapping of CGC

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