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Cluster: SPMP65_bin.15_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_110136 opera_contig_110136_139 151318 152592 + 2.A.47.4.1
STP opera_contig_110136 opera_contig_110136_140 152826 155609 + HATPase_c | HisKA | Response_reg | SBP_bac_3 | SBP_bac_3
TF opera_contig_110136 opera_contig_110136_141 155640 156437 + HTH_AraC | HTH_AraC
CAZyme opera_contig_110136 opera_contig_110136_142 156535 158946 - GH94
CAZyme opera_contig_110136 opera_contig_110136_143 159025 160803 - GH94
Gene ID: opera_contig_110136_139
Type: TC
Location: 151318 - 152592 (+)
Gene ID: opera_contig_110136_140
Type: STP
Location: 152826 - 155609 (+)
Gene ID: opera_contig_110136_141
Type: TF
Location: 155640 - 156437 (+)
Gene ID: opera_contig_110136_142
Type: CAZyme
Location: 156535 - 158946 (-)
Gene ID: opera_contig_110136_143
Type: CAZyme
Location: 159025 - 160803 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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