dbCAN Logo

Cluster: SPMP65_bin.15_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_110136 opera_contig_110136_20 27468 28436 + GH109
STP opera_contig_110136 opera_contig_110136_21 28429 28743 + Peripla_BP_3
TC opera_contig_110136 opera_contig_110136_22 28786 29718 + 8.A.5.1.7
NULL(UNKNOWN) opera_contig_110136 opera_contig_110136_23 29890 30411 - NULL(UNKNOWN)
[View Structural Homologs]
TC opera_contig_110136 opera_contig_110136_24 31383 32099 + 3.A.1.125.2
pfam opera_contig_110136 opera_contig_110136_25 32103 35885 + FtsX | FtsX
TC opera_contig_110136 opera_contig_110136_26 36008 36727 + 4.A.1.1.7
Gene ID: opera_contig_110136_20
Type: CAZyme
Location: 27468 - 28436 (+)
Gene ID: opera_contig_110136_21
Type: STP
Location: 28429 - 28743 (+)
Gene ID: opera_contig_110136_22
Type: TC
Location: 28786 - 29718 (+)
Gene ID: opera_contig_110136_23
Type:
Location: 29890 - 30411 (-)
Gene ID: opera_contig_110136_24
Type: TC
Location: 31383 - 32099 (+)
Gene ID: opera_contig_110136_25
Type: pfam
Location: 32103 - 35885 (+)
Gene ID: opera_contig_110136_26
Type: TC
Location: 36008 - 36727 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List