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Cluster: SPMP65_bin.15_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_110135 opera_contig_110135_251 266204 268624 - GH3
STP opera_contig_110135 opera_contig_110135_252 268643 269257 - NUDIX
TC opera_contig_110135 opera_contig_110135_253 269419 270054 - 2.A.87.1.4
CAZyme opera_contig_110135 opera_contig_110135_254 270426 272102 - GH13_31
TF opera_contig_110135 opera_contig_110135_255 272268 273275 - LacI
pfam opera_contig_110135 opera_contig_110135_256 273303 274034 - ABC2_membrane | ABC2_membrane_3
TC opera_contig_110135 opera_contig_110135_257 274063 274905 - 3.A.1.105.17
pfam opera_contig_110135 opera_contig_110135_258 274902 275597 - TP_methylase
NULL(UNKNOWN) opera_contig_110135 opera_contig_110135_259 275843 276361 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_110135 opera_contig_110135_260 276443 277753 - GH29
pfam opera_contig_110135 opera_contig_110135_261 277772 280270 - Transglut_core
TC opera_contig_110135 opera_contig_110135_262 280270 281016 - 9.B.158.1.1
TF opera_contig_110135 opera_contig_110135_263 281089 281850 - HTH_DeoR
TC opera_contig_110135 opera_contig_110135_264 281900 282874 - 3.A.1.5.20
TC opera_contig_110135 opera_contig_110135_265 282878 283867 - 3.A.1.5.20
TC opera_contig_110135 opera_contig_110135_266 283880 284779 - 3.A.1.5.11
TC opera_contig_110135 opera_contig_110135_267 284793 285713 - 3.A.1.5.11
TC opera_contig_110135 opera_contig_110135_268 285920 287530 - 3.A.1.5.11
TC opera_contig_110135 opera_contig_110135_269 287886 288764 - 1.A.23.2.2
Gene ID: opera_contig_110135_251
Type: CAZyme
Location: 266204 - 268624 (-)
Gene ID: opera_contig_110135_252
Type: STP
Location: 268643 - 269257 (-)
Gene ID: opera_contig_110135_253
Type: TC
Location: 269419 - 270054 (-)
Gene ID: opera_contig_110135_254
Type: CAZyme
Location: 270426 - 272102 (-)
Gene ID: opera_contig_110135_255
Type: TF
Location: 272268 - 273275 (-)
Gene ID: opera_contig_110135_256
Type: pfam
Location: 273303 - 274034 (-)
Gene ID: opera_contig_110135_257
Type: TC
Location: 274063 - 274905 (-)
Gene ID: opera_contig_110135_258
Type: pfam
Location: 274902 - 275597 (-)
Gene ID: opera_contig_110135_259
Type:
Location: 275843 - 276361 (+)
Gene ID: opera_contig_110135_260
Type: CAZyme
Location: 276443 - 277753 (-)
Gene ID: opera_contig_110135_261
Type: pfam
Location: 277772 - 280270 (-)
Gene ID: opera_contig_110135_262
Type: TC
Location: 280270 - 281016 (-)
Gene ID: opera_contig_110135_263
Type: TF
Location: 281089 - 281850 (-)
Gene ID: opera_contig_110135_264
Type: TC
Location: 281900 - 282874 (-)
Gene ID: opera_contig_110135_265
Type: TC
Location: 282878 - 283867 (-)
Gene ID: opera_contig_110135_266
Type: TC
Location: 283880 - 284779 (-)
Gene ID: opera_contig_110135_267
Type: TC
Location: 284793 - 285713 (-)
Gene ID: opera_contig_110135_268
Type: TC
Location: 285920 - 287530 (-)
Gene ID: opera_contig_110135_269
Type: TC
Location: 287886 - 288764 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_110135_252 vegan > omnivore 1.72386 0.01794

🧭 Explore Read Mapping of CGC

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