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Cluster: SPMP65_bin.15_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_210 opera_contig_210_28 26784 29552 - GH3
STP opera_contig_210 opera_contig_210_29 29699 31369 - HATPase_c | HisKA
pfam opera_contig_210 opera_contig_210_30 31479 32156 - PhoU | PhoU
TC opera_contig_210 opera_contig_210_31 32153 32911 - 3.A.1.7.5
TC opera_contig_210 opera_contig_210_32 32917 33822 - 3.A.1.7.5
TC opera_contig_210 opera_contig_210_33 33812 34669 - 3.A.1.7.5
Gene ID: opera_contig_210_28
Type: CAZyme
Location: 26784 - 29552 (-)
Gene ID: opera_contig_210_29
Type: STP
Location: 29699 - 31369 (-)
Gene ID: opera_contig_210_30
Type: pfam
Location: 31479 - 32156 (-)
Gene ID: opera_contig_210_31
Type: TC
Location: 32153 - 32911 (-)
Gene ID: opera_contig_210_32
Type: TC
Location: 32917 - 33822 (-)
Gene ID: opera_contig_210_33
Type: TC
Location: 33812 - 34669 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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