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Cluster: SPMP65_bin.15_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_19 opera_contig_19_143 143507 144388 + 3.A.1.1.45
TC opera_contig_19 opera_contig_19_144 144388 145248 + 3.A.1.1.45
CAZyme opera_contig_19 opera_contig_19_145 145361 146854 + GH32
CAZyme opera_contig_19 opera_contig_19_146 146889 148511 + GH13_31
CAZyme opera_contig_19 opera_contig_19_147 148537 150486 + GH13_4
pfam opera_contig_19 opera_contig_19_148 150706 152394 + Metallophos | Pur_ac_phosph_N
TC opera_contig_19 opera_contig_19_149 152420 153565 + 9.B.141.1.3
TC opera_contig_19 opera_contig_19_150 153609 154154 - 3.A.1.25.3
Gene ID: opera_contig_19_143
Type: TC
Location: 143507 - 144388 (+)
Gene ID: opera_contig_19_144
Type: TC
Location: 144388 - 145248 (+)
Gene ID: opera_contig_19_145
Type: CAZyme
Location: 145361 - 146854 (+)
Gene ID: opera_contig_19_146
Type: CAZyme
Location: 146889 - 148511 (+)
Gene ID: opera_contig_19_147
Type: CAZyme
Location: 148537 - 150486 (+)
Gene ID: opera_contig_19_148
Type: pfam
Location: 150706 - 152394 (+)
Gene ID: opera_contig_19_149
Type: TC
Location: 152420 - 153565 (+)
Gene ID: opera_contig_19_150
Type: TC
Location: 153609 - 154154 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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