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Cluster: SPMP65_bin.15_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_13 opera_contig_13_15 14351 15997 + CBM91 | GH43_11
CAZyme opera_contig_13 opera_contig_13_16 16129 17697 + GH13_44
TC opera_contig_13 opera_contig_13_17 17812 19218 + 2.A.66.1.28
TC opera_contig_13 opera_contig_13_18 19729 20697 + 2.A.4.7.9
TF opera_contig_13 opera_contig_13_19 20776 21396 - GerE
pfam opera_contig_13 opera_contig_13_20 21412 22497 - HATPase_c | HisKA_3
TC opera_contig_13 opera_contig_13_21 22705 23646 + 3.A.1.105.9
Gene ID: opera_contig_13_15
Type: CAZyme
Location: 14351 - 15997 (+)
Gene ID: opera_contig_13_16
Type: CAZyme
Location: 16129 - 17697 (+)
Gene ID: opera_contig_13_17
Type: TC
Location: 17812 - 19218 (+)
Gene ID: opera_contig_13_18
Type: TC
Location: 19729 - 20697 (+)
Gene ID: opera_contig_13_19
Type: TF
Location: 20776 - 21396 (-)
Gene ID: opera_contig_13_20
Type: pfam
Location: 21412 - 22497 (-)
Gene ID: opera_contig_13_21
Type: TC
Location: 22705 - 23646 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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