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Cluster: SPMP65_bin.15_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_12 opera_contig_12_67 82805 84427 + 2.A.35.2.1
pfam opera_contig_12 opera_contig_12_68 84792 85709 + SH3_3
pfam opera_contig_12 opera_contig_12_69 86720 87397 - HTH_23 | HTH_28 | HTH_28 | HTH_28 | HTH_29
CAZyme opera_contig_12 opera_contig_12_70 87955 89181 - CE4
Gene ID: opera_contig_12_67
Type: TC
Location: 82805 - 84427 (+)
Gene ID: opera_contig_12_68
Type: pfam
Location: 84792 - 85709 (+)
Gene ID: opera_contig_12_69
Type: pfam
Location: 86720 - 87397 (-)
Gene ID: opera_contig_12_70
Type: CAZyme
Location: 87955 - 89181 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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