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Cluster: SPMP65_bin.15_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_5 opera_contig_5_129 129362 130426 + 3.A.1.13.2
TC opera_contig_5 opera_contig_5_130 130428 131549 + 3.A.1.13.2
pfam opera_contig_5 opera_contig_5_131 131801 132310 + KOW | NusG
TC opera_contig_5 opera_contig_5_132 132470 133921 + 9.B.18.1.2
CAZyme opera_contig_5 opera_contig_5_133 134930 136198 + GT4
pfam opera_contig_5 opera_contig_5_134 136213 136797 + Hexapep | Hexapep_2
CAZyme opera_contig_5 opera_contig_5_135 136797 137900 + GT4
CAZyme opera_contig_5 opera_contig_5_136 137910 139016 + GT4
CAZyme opera_contig_5 opera_contig_5_137 139032 139769 + GT2
CAZyme opera_contig_5 opera_contig_5_138 139771 140673 + GT2
pfam opera_contig_5 opera_contig_5_139 140696 142123 + O-ag_pol_Wzy
TC opera_contig_5 opera_contig_5_140 142327 143772 + 2.A.66.2.16
Gene ID: opera_contig_5_129
Type: TC
Location: 129362 - 130426 (+)
Gene ID: opera_contig_5_130
Type: TC
Location: 130428 - 131549 (+)
Gene ID: opera_contig_5_131
Type: pfam
Location: 131801 - 132310 (+)
Gene ID: opera_contig_5_132
Type: TC
Location: 132470 - 133921 (+)
Gene ID: opera_contig_5_133
Type: CAZyme
Location: 134930 - 136198 (+)
Gene ID: opera_contig_5_134
Type: pfam
Location: 136213 - 136797 (+)
Gene ID: opera_contig_5_135
Type: CAZyme
Location: 136797 - 137900 (+)
Gene ID: opera_contig_5_136
Type: CAZyme
Location: 137910 - 139016 (+)
Gene ID: opera_contig_5_137
Type: CAZyme
Location: 139032 - 139769 (+)
Gene ID: opera_contig_5_138
Type: CAZyme
Location: 139771 - 140673 (+)
Gene ID: opera_contig_5_139
Type: pfam
Location: 140696 - 142123 (+)
Gene ID: opera_contig_5_140
Type: TC
Location: 142327 - 143772 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_5_134 vegan > omnivore 1.49829 0.01794

🧭 Explore Read Mapping of CGC

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