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Cluster: SPMP60_bin.73_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_2 opera_contig_2_158 172991 173917 - CE7
TC opera_contig_2 opera_contig_2_159 174049 174876 - 3.A.1.5.27
TC opera_contig_2 opera_contig_2_160 174877 176892 - 3.A.1.5.25
TC opera_contig_2 opera_contig_2_161 176896 177852 - 3.A.1.5.38
TC opera_contig_2 opera_contig_2_162 178010 179623 - 3.A.1.5.27
pfam opera_contig_2 opera_contig_2_163 179988 181928 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC opera_contig_2 opera_contig_2_164 181935 183617 - 2.A.66.4.4
Gene ID: opera_contig_2_158
Type: CAZyme
Location: 172991 - 173917 (-)
Gene ID: opera_contig_2_159
Type: TC
Location: 174049 - 174876 (-)
Gene ID: opera_contig_2_160
Type: TC
Location: 174877 - 176892 (-)
Gene ID: opera_contig_2_161
Type: TC
Location: 176896 - 177852 (-)
Gene ID: opera_contig_2_162
Type: TC
Location: 178010 - 179623 (-)
Gene ID: opera_contig_2_163
Type: pfam
Location: 179988 - 181928 (-)
Gene ID: opera_contig_2_164
Type: TC
Location: 181935 - 183617 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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