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Cluster: SPMP60_bin.73_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_2 opera_contig_2_138 148628 150361 - GH13_30
STP opera_contig_2 opera_contig_2_139 151102 151848 - STAS
STP opera_contig_2 opera_contig_2_140 151927 154272 - GAF | SpoIIE
TC opera_contig_2 opera_contig_2_141 155016 156044 - 3.A.1.5.36
TC opera_contig_2 opera_contig_2_142 156044 157135 - 3.A.1.5.37
TC opera_contig_2 opera_contig_2_143 157138 158073 - 3.A.1.5.11
TC opera_contig_2 opera_contig_2_144 158088 159125 - 3.A.1.5.37
TC opera_contig_2 opera_contig_2_145 159283 160959 - 3.A.1.5.35
Gene ID: opera_contig_2_138
Type: CAZyme
Location: 148628 - 150361 (-)
Gene ID: opera_contig_2_139
Type: STP
Location: 151102 - 151848 (-)
Gene ID: opera_contig_2_140
Type: STP
Location: 151927 - 154272 (-)
Gene ID: opera_contig_2_141
Type: TC
Location: 155016 - 156044 (-)
Gene ID: opera_contig_2_142
Type: TC
Location: 156044 - 157135 (-)
Gene ID: opera_contig_2_143
Type: TC
Location: 157138 - 158073 (-)
Gene ID: opera_contig_2_144
Type: TC
Location: 158088 - 159125 (-)
Gene ID: opera_contig_2_145
Type: TC
Location: 159283 - 160959 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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