Cluster: SPMP58_bin.50_CGC4
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: SPMP58_bin.50
- CGC Family ID: CGCFAM_00684
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_110330 | opera_contig_110330_338 | 362295 | 363368 | - | GH177 |
| pfam | opera_contig_110330 | opera_contig_110330_339 | 363388 | 364467 | - | Epimerase_2 |
| pfam | opera_contig_110330 | opera_contig_110330_340 | 364479 | 365792 | - | UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | opera_contig_110330 | opera_contig_110330_341 | 365805 | 366920 | - | GT4 |
| CAZyme | opera_contig_110330 | opera_contig_110330_342 | 366917 | 368029 | - | GT4 |
| CAZyme | opera_contig_110330 | opera_contig_110330_343 | 368029 | 369276 | - | GT4 |
| TC | opera_contig_110330 | opera_contig_110330_344 | 369295 | 369975 | - | 9.B.18.1.3 |
| pfam | opera_contig_110330 | opera_contig_110330_345 | 369990 | 371192 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | opera_contig_110330 | opera_contig_110330_346 | 371195 | 373135 | - | 9.B.18.2.1 |
| CAZyme | opera_contig_110330 | opera_contig_110330_347 | 373297 | 376278 | - | GH73 |
| pfam | opera_contig_110330 | opera_contig_110330_348 | 376302 | 376826 | - | Germane |
| pfam | opera_contig_110330 | opera_contig_110330_349 | 377058 | 377975 | - | NTP_transferase |
| TC | opera_contig_110330 | opera_contig_110330_350 | 377993 | 378256 | - | 8.A.8.1.1 |
Gene ID: opera_contig_110330_338
Type: CAZyme
Location: 362295 - 363368 (-)
Type: CAZyme
Location: 362295 - 363368 (-)
Gene ID: opera_contig_110330_339
Type: pfam
Location: 363388 - 364467 (-)
Type: pfam
Location: 363388 - 364467 (-)
Gene ID: opera_contig_110330_340
Type: pfam
Location: 364479 - 365792 (-)
Type: pfam
Location: 364479 - 365792 (-)
Gene ID: opera_contig_110330_341
Type: CAZyme
Location: 365805 - 366920 (-)
Type: CAZyme
Location: 365805 - 366920 (-)
Gene ID: opera_contig_110330_342
Type: CAZyme
Location: 366917 - 368029 (-)
Type: CAZyme
Location: 366917 - 368029 (-)
Gene ID: opera_contig_110330_343
Type: CAZyme
Location: 368029 - 369276 (-)
Type: CAZyme
Location: 368029 - 369276 (-)
Gene ID: opera_contig_110330_344
Type: TC
Location: 369295 - 369975 (-)
Type: TC
Location: 369295 - 369975 (-)
Gene ID: opera_contig_110330_345
Type: pfam
Location: 369990 - 371192 (-)
Type: pfam
Location: 369990 - 371192 (-)
Gene ID: opera_contig_110330_346
Type: TC
Location: 371195 - 373135 (-)
Type: TC
Location: 371195 - 373135 (-)
Gene ID: opera_contig_110330_347
Type: CAZyme
Location: 373297 - 376278 (-)
Type: CAZyme
Location: 373297 - 376278 (-)
Gene ID: opera_contig_110330_348
Type: pfam
Location: 376302 - 376826 (-)
Type: pfam
Location: 376302 - 376826 (-)
Gene ID: opera_contig_110330_349
Type: pfam
Location: 377058 - 377975 (-)
Type: pfam
Location: 377058 - 377975 (-)
Gene ID: opera_contig_110330_350
Type: TC
Location: 377993 - 378256 (-)
Type: TC
Location: 377993 - 378256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas phoceensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.