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Cluster: SPMP58_bin.50_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_110334 opera_contig_110334_187 180274 180717 - 3.A.3.4.1
TC opera_contig_110334 opera_contig_110334_188 180846 182528 - 3.A.3.4.1
TF opera_contig_110334 opera_contig_110334_189 182808 183659 - HTH_AraC | HTH_AraC
CAZyme opera_contig_110334 opera_contig_110334_190 183821 186886 + GH2
TC opera_contig_110334 opera_contig_110334_191 186893 188209 + 2.A.2.3.3
Gene ID: opera_contig_110334_187
Type: TC
Location: 180274 - 180717 (-)
Gene ID: opera_contig_110334_188
Type: TC
Location: 180846 - 182528 (-)
Gene ID: opera_contig_110334_189
Type: TF
Location: 182808 - 183659 (-)
Gene ID: opera_contig_110334_190
Type: CAZyme
Location: 183821 - 186886 (+)
Gene ID: opera_contig_110334_191
Type: TC
Location: 186893 - 188209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_110334_191 vegan > omnivore 1.00369 0.02242

🧭 Explore Read Mapping of CGC

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