Cluster: SPMP58_bin.50_CGC2
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP58_bin.50
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110330 | opera_contig_110330_141 | 139592 | 140905 | - | 2.A.40.2.1 |
| STP | opera_contig_110330 | opera_contig_110330_142 | 141033 | 141944 | - | HATPase_c | HisKA |
| pfam | opera_contig_110330 | opera_contig_110330_143 | 141962 | 142786 | - | ABC2_membrane_2 | ABC2_membrane_4 |
| TC | opera_contig_110330 | opera_contig_110330_144 | 142779 | 143693 | - | 3.A.1.131.1 |
| TF | opera_contig_110330 | opera_contig_110330_145 | 143783 | 144448 | - | Trans_reg_C |
| STP | opera_contig_110330 | opera_contig_110330_146 | 144512 | 145888 | - | PALP |
| CAZyme | opera_contig_110330 | opera_contig_110330_147 | 146280 | 147731 | - | GH1 |
| TC | opera_contig_110330 | opera_contig_110330_148 | 147754 | 149643 | - | 4.A.1.2.11 |
| pfam | opera_contig_110330 | opera_contig_110330_149 | 149783 | 150619 | - | PRD | PRD | CAT_RBD |
| STP | opera_contig_110330 | opera_contig_110330_150 | 150821 | 151414 | - | TetR_N |
| TC | opera_contig_110330 | opera_contig_110330_151 | 151611 | 154136 | + | 9.B.74.1.1 |
| TC | opera_contig_110330 | opera_contig_110330_152 | 154141 | 156318 | + | 9.B.74.1.1 |
Gene ID: opera_contig_110330_141
Type: TC
Location: 139592 - 140905 (-)
Type: TC
Location: 139592 - 140905 (-)
Gene ID: opera_contig_110330_142
Type: STP
Location: 141033 - 141944 (-)
Type: STP
Location: 141033 - 141944 (-)
Gene ID: opera_contig_110330_143
Type: pfam
Location: 141962 - 142786 (-)
Type: pfam
Location: 141962 - 142786 (-)
Gene ID: opera_contig_110330_144
Type: TC
Location: 142779 - 143693 (-)
Type: TC
Location: 142779 - 143693 (-)
Gene ID: opera_contig_110330_145
Type: TF
Location: 143783 - 144448 (-)
Type: TF
Location: 143783 - 144448 (-)
Gene ID: opera_contig_110330_146
Type: STP
Location: 144512 - 145888 (-)
Type: STP
Location: 144512 - 145888 (-)
Gene ID: opera_contig_110330_147
Type: CAZyme
Location: 146280 - 147731 (-)
Type: CAZyme
Location: 146280 - 147731 (-)
Gene ID: opera_contig_110330_148
Type: TC
Location: 147754 - 149643 (-)
Type: TC
Location: 147754 - 149643 (-)
Gene ID: opera_contig_110330_149
Type: pfam
Location: 149783 - 150619 (-)
Type: pfam
Location: 149783 - 150619 (-)
Gene ID: opera_contig_110330_150
Type: STP
Location: 150821 - 151414 (-)
Type: STP
Location: 150821 - 151414 (-)
Gene ID: opera_contig_110330_151
Type: TC
Location: 151611 - 154136 (+)
Type: TC
Location: 151611 - 154136 (+)
Gene ID: opera_contig_110330_152
Type: TC
Location: 154141 - 156318 (+)
Type: TC
Location: 154141 - 156318 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas phoceensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_110330_146 | vegan > omnivore | 1.12199 | 0.02242 |