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Cluster: SPMP58_bin.50_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_110331 opera_contig_110331_476 531958 533466 + 3.A.1.2.3
TC opera_contig_110331 opera_contig_110331_477 533485 535140 + 3.A.1.2.3
TF opera_contig_110331 opera_contig_110331_478 535265 536878 + HTH_AraC | HTH_AraC
TC opera_contig_110331 opera_contig_110331_479 536868 538730 + 8.A.59.2.1
STP opera_contig_110331 opera_contig_110331_480 538720 539685 + Peripla_BP_1
TC opera_contig_110331 opera_contig_110331_481 539703 540719 + 3.A.1.2.3
NULL(UNKNOWN) opera_contig_110331 opera_contig_110331_482 540745 541263 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme opera_contig_110331 opera_contig_110331_483 541353 542660 - GH13_20
Gene ID: opera_contig_110331_476
Type: TC
Location: 531958 - 533466 (+)
Gene ID: opera_contig_110331_477
Type: TC
Location: 533485 - 535140 (+)
Gene ID: opera_contig_110331_478
Type: TF
Location: 535265 - 536878 (+)
Gene ID: opera_contig_110331_479
Type: TC
Location: 536868 - 538730 (+)
Gene ID: opera_contig_110331_480
Type: STP
Location: 538720 - 539685 (+)
Gene ID: opera_contig_110331_481
Type: TC
Location: 539703 - 540719 (+)
Gene ID: opera_contig_110331_482
Type:
Location: 540745 - 541263 (+)
Gene ID: opera_contig_110331_483
Type: CAZyme
Location: 541353 - 542660 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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