Cluster: SPMP58_bin.50_CGC17
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP58_bin.50
- CGC Family ID: CGCFAM_00242
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110331 | opera_contig_110331_395 | 441048 | 441485 | + | 3.A.7.19.1 |
| pfam | opera_contig_110331 | opera_contig_110331_396 | 441551 | 441814 | + | Ribosomal_S18 |
| TC | opera_contig_110331 | opera_contig_110331_397 | 441873 | 442436 | - | 2.A.51.1.6 |
| pfam | opera_contig_110331 | opera_contig_110331_398 | 442433 | 443011 | - | Chromate_transp |
| TF | opera_contig_110331 | opera_contig_110331_399 | 443073 | 443993 | - | HTH_AraC |
| CAZyme | opera_contig_110331 | opera_contig_110331_400 | 444254 | 446416 | + | GH112 |
| STP | opera_contig_110331 | opera_contig_110331_401 | 446661 | 448028 | + | SBP_bac_1 |
| TC | opera_contig_110331 | opera_contig_110331_402 | 448116 | 449006 | + | 3.A.1.1.7 |
| TC | opera_contig_110331 | opera_contig_110331_403 | 449025 | 449891 | + | 3.A.1.1.18 |
Gene ID: opera_contig_110331_395
Type: TC
Location: 441048 - 441485 (+)
Type: TC
Location: 441048 - 441485 (+)
Gene ID: opera_contig_110331_396
Type: pfam
Location: 441551 - 441814 (+)
Type: pfam
Location: 441551 - 441814 (+)
Gene ID: opera_contig_110331_397
Type: TC
Location: 441873 - 442436 (-)
Type: TC
Location: 441873 - 442436 (-)
Gene ID: opera_contig_110331_398
Type: pfam
Location: 442433 - 443011 (-)
Type: pfam
Location: 442433 - 443011 (-)
Gene ID: opera_contig_110331_399
Type: TF
Location: 443073 - 443993 (-)
Type: TF
Location: 443073 - 443993 (-)
Gene ID: opera_contig_110331_400
Type: CAZyme
Location: 444254 - 446416 (+)
Type: CAZyme
Location: 444254 - 446416 (+)
Gene ID: opera_contig_110331_401
Type: STP
Location: 446661 - 448028 (+)
Type: STP
Location: 446661 - 448028 (+)
Gene ID: opera_contig_110331_402
Type: TC
Location: 448116 - 449006 (+)
Type: TC
Location: 448116 - 449006 (+)
Gene ID: opera_contig_110331_403
Type: TC
Location: 449025 - 449891 (+)
Type: TC
Location: 449025 - 449891 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas phoceensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.