Cluster: SPMP58_bin.50_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP58_bin.50
- CGC Family ID: CGCFAM_00054
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_110330 | opera_contig_110330_689 | 784798 | 785427 | - | 2.A.115.2.3 |
| CAZyme | opera_contig_110330 | opera_contig_110330_690 | 785431 | 787674 | - | GH36 |
| TC | opera_contig_110330 | opera_contig_110330_691 | 787709 | 789127 | - | 2.A.2.1.1 |
| TF | opera_contig_110330 | opera_contig_110330_692 | 789305 | 790222 | - | HTH_AraC | HTH_AraC |
| peptidase | opera_contig_110330 | opera_contig_110330_693 | 790750 | 792294 | - | C26.A07 |
| TC | opera_contig_110330 | opera_contig_110330_694 | 792410 | 794740 | - | 9.A.8.1.6 |
Gene ID: opera_contig_110330_689
Type: TC
Location: 784798 - 785427 (-)
Type: TC
Location: 784798 - 785427 (-)
Gene ID: opera_contig_110330_690
Type: CAZyme
Location: 785431 - 787674 (-)
Type: CAZyme
Location: 785431 - 787674 (-)
Gene ID: opera_contig_110330_691
Type: TC
Location: 787709 - 789127 (-)
Type: TC
Location: 787709 - 789127 (-)
Gene ID: opera_contig_110330_692
Type: TF
Location: 789305 - 790222 (-)
Type: TF
Location: 789305 - 790222 (-)
Gene ID: opera_contig_110330_693
Type: peptidase
Location: 790750 - 792294 (-)
Type: peptidase
Location: 790750 - 792294 (-)
Gene ID: opera_contig_110330_694
Type: TC
Location: 792410 - 794740 (-)
Type: TC
Location: 792410 - 794740 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Faecalimonas
Species
Faecalimonas phoceensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_110330_691 | vegan > omnivore | 2.07010 | 0.02242 |
| opera_contig_110330_691 | vegetarian > omnivore | 1.39504 | 0.01276 |
| opera_contig_110330_692 | vegan > omnivore | 1.27881 | 0.02242 |