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Cluster: SPMP58_bin.50_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_110330 opera_contig_110330_2 531 1370 - 3.A.1.132.3
pfam opera_contig_110330 opera_contig_110330_3 1384 1761 - Ribonuc_L-PSP
pfam opera_contig_110330 opera_contig_110330_4 1832 2806 - OCD_Mu_crystall
CAZyme opera_contig_110330 opera_contig_110330_5 3005 5101 + GH13_11
pfam opera_contig_110330 opera_contig_110330_6 5130 6323 - DnaJ | DnaJ_CXXCXGXG | DnaJ_C
TC opera_contig_110330 opera_contig_110330_7 6442 8316 - 1.A.33.1.4
pfam opera_contig_110330 opera_contig_110330_8 8445 9086 - GrpE
TF opera_contig_110330 opera_contig_110330_9 9104 10147 - 0043758
TC opera_contig_110330 opera_contig_110330_10 10330 11676 - 2.A.66.1.33
Gene ID: opera_contig_110330_2
Type: TC
Location: 531 - 1370 (-)
Gene ID: opera_contig_110330_3
Type: pfam
Location: 1384 - 1761 (-)
Gene ID: opera_contig_110330_4
Type: pfam
Location: 1832 - 2806 (-)
Gene ID: opera_contig_110330_5
Type: CAZyme
Location: 3005 - 5101 (+)
Gene ID: opera_contig_110330_6
Type: pfam
Location: 5130 - 6323 (-)
Gene ID: opera_contig_110330_7
Type: TC
Location: 6442 - 8316 (-)
Gene ID: opera_contig_110330_8
Type: pfam
Location: 8445 - 9086 (-)
Gene ID: opera_contig_110330_9
Type: TF
Location: 9104 - 10147 (-)
Gene ID: opera_contig_110330_10
Type: TC
Location: 10330 - 11676 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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