Cluster: SPMP46_bin.66_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP46_bin.66
- CGC Family ID: CGCFAM_11059
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_117270 | opera_contig_117270_80 | 77066 | 78922 | + | 3.A.16.1.2 |
| pfam | opera_contig_117270 | opera_contig_117270_81 | 79326 | 80429 | + | OrfB_IS605 | Cas12f1-like_TNB | HTH_OrfB_IS605 |
| CAZyme | opera_contig_117270 | opera_contig_117270_82 | 80762 | 82819 | + | GH13_39 |
| pfam | opera_contig_117270 | opera_contig_117270_83 | 83189 | 84058 | + | Radical_SAM |
| pfam | opera_contig_117270 | opera_contig_117270_84 | 84556 | 85068 | + | YpsA |
| TC | opera_contig_117270 | opera_contig_117270_85 | 85087 | 86277 | + | 2.A.86.1.8 |
Gene ID: opera_contig_117270_80
Type: TC
Location: 77066 - 78922 (+)
Type: TC
Location: 77066 - 78922 (+)
Gene ID: opera_contig_117270_81
Type: pfam
Location: 79326 - 80429 (+)
Type: pfam
Location: 79326 - 80429 (+)
Gene ID: opera_contig_117270_82
Type: CAZyme
Location: 80762 - 82819 (+)
Type: CAZyme
Location: 80762 - 82819 (+)
Gene ID: opera_contig_117270_83
Type: pfam
Location: 83189 - 84058 (+)
Type: pfam
Location: 83189 - 84058 (+)
Gene ID: opera_contig_117270_84
Type: pfam
Location: 84556 - 85068 (+)
Type: pfam
Location: 84556 - 85068 (+)
Gene ID: opera_contig_117270_85
Type: TC
Location: 85087 - 86277 (+)
Type: TC
Location: 85087 - 86277 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus_A
Species
Coprococcus_A catus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.