Cluster: SPMP46_bin.66_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP46_bin.66
- CGC Family ID: CGCFAM_00105
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_117265 | opera_contig_117265_90 | 95119 | 96078 | - | GT2 |
| TC | opera_contig_117265 | opera_contig_117265_91 | 96100 | 96828 | - | 3.A.1.103.4 |
| TC | opera_contig_117265 | opera_contig_117265_92 | 96830 | 97609 | - | 3.A.1.103.2 |
Gene ID: opera_contig_117265_90
Type: CAZyme
Location: 95119 - 96078 (-)
Type: CAZyme
Location: 95119 - 96078 (-)
Gene ID: opera_contig_117265_91
Type: TC
Location: 96100 - 96828 (-)
Type: TC
Location: 96100 - 96828 (-)
Gene ID: opera_contig_117265_92
Type: TC
Location: 96830 - 97609 (-)
Type: TC
Location: 96830 - 97609 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus_A
Species
Coprococcus_A catus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_117265_91 | vegan > omnivore | 1.60559 | 0.01924 |