Cluster: SPMP46_bin.66_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP46_bin.66
- CGC Family ID: CGCFAM_11060
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_117265 | opera_contig_117265_16 | 15191 | 16585 | - | 2.A.25.1.5 |
| CAZyme | opera_contig_117265 | opera_contig_117265_17 | 16826 | 18310 | - | GH77 |
| TF | opera_contig_117265 | opera_contig_117265_18 | 18307 | 19341 | - | LacI |
| TC | opera_contig_117265 | opera_contig_117265_19 | 19454 | 20290 | - | 3.A.1.1.45 |
| TC | opera_contig_117265 | opera_contig_117265_20 | 20291 | 21133 | - | 3.A.1.1.45 |
| TC | opera_contig_117265 | opera_contig_117265_21 | 21284 | 22669 | - | 3.A.1.1.45 |
| pfam | opera_contig_117265 | opera_contig_117265_22 | 22996 | 24594 | - | Prismane |
| TF | opera_contig_117265 | opera_contig_117265_23 | 24680 | 25342 | + | 0038753 |
| TC | opera_contig_117265 | opera_contig_117265_24 | 25348 | 27513 | - | 9.B.74.1.4 |
Gene ID: opera_contig_117265_16
Type: TC
Location: 15191 - 16585 (-)
Type: TC
Location: 15191 - 16585 (-)
Gene ID: opera_contig_117265_17
Type: CAZyme
Location: 16826 - 18310 (-)
Type: CAZyme
Location: 16826 - 18310 (-)
Gene ID: opera_contig_117265_18
Type: TF
Location: 18307 - 19341 (-)
Type: TF
Location: 18307 - 19341 (-)
Gene ID: opera_contig_117265_19
Type: TC
Location: 19454 - 20290 (-)
Type: TC
Location: 19454 - 20290 (-)
Gene ID: opera_contig_117265_20
Type: TC
Location: 20291 - 21133 (-)
Type: TC
Location: 20291 - 21133 (-)
Gene ID: opera_contig_117265_21
Type: TC
Location: 21284 - 22669 (-)
Type: TC
Location: 21284 - 22669 (-)
Gene ID: opera_contig_117265_22
Type: pfam
Location: 22996 - 24594 (-)
Type: pfam
Location: 22996 - 24594 (-)
Gene ID: opera_contig_117265_23
Type: TF
Location: 24680 - 25342 (+)
Type: TF
Location: 24680 - 25342 (+)
Gene ID: opera_contig_117265_24
Type: TC
Location: 25348 - 27513 (-)
Type: TC
Location: 25348 - 27513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus_A
Species
Coprococcus_A catus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_117265_16 | vegetarian > vegan | 1.06510 | 0.03783 |