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Cluster: SPMP46_bin.66_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_117265 opera_contig_117265_16 15191 16585 - 2.A.25.1.5
CAZyme opera_contig_117265 opera_contig_117265_17 16826 18310 - GH77
TF opera_contig_117265 opera_contig_117265_18 18307 19341 - LacI
TC opera_contig_117265 opera_contig_117265_19 19454 20290 - 3.A.1.1.45
TC opera_contig_117265 opera_contig_117265_20 20291 21133 - 3.A.1.1.45
TC opera_contig_117265 opera_contig_117265_21 21284 22669 - 3.A.1.1.45
pfam opera_contig_117265 opera_contig_117265_22 22996 24594 - Prismane
TF opera_contig_117265 opera_contig_117265_23 24680 25342 + 0038753
TC opera_contig_117265 opera_contig_117265_24 25348 27513 - 9.B.74.1.4
Gene ID: opera_contig_117265_16
Type: TC
Location: 15191 - 16585 (-)
Gene ID: opera_contig_117265_17
Type: CAZyme
Location: 16826 - 18310 (-)
Gene ID: opera_contig_117265_18
Type: TF
Location: 18307 - 19341 (-)
Gene ID: opera_contig_117265_19
Type: TC
Location: 19454 - 20290 (-)
Gene ID: opera_contig_117265_20
Type: TC
Location: 20291 - 21133 (-)
Gene ID: opera_contig_117265_21
Type: TC
Location: 21284 - 22669 (-)
Gene ID: opera_contig_117265_22
Type: pfam
Location: 22996 - 24594 (-)
Gene ID: opera_contig_117265_23
Type: TF
Location: 24680 - 25342 (+)
Gene ID: opera_contig_117265_24
Type: TC
Location: 25348 - 27513 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_117265_16 vegetarian > vegan 1.06510 0.03783

🧭 Explore Read Mapping of CGC

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