Cluster: SPMP46_bin.66_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP46_bin.66
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_117272 | opera_contig_117272_10 | 11899 | 12534 | + | 9.B.104.1.3 |
| TC | opera_contig_117272 | opera_contig_117272_11 | 12478 | 13149 | - | 2.A.21.9.1 |
| pfam | opera_contig_117272 | opera_contig_117272_12 | 13325 | 13744 | + | HIT | DcpS_C |
| CAZyme | opera_contig_117272 | opera_contig_117272_13 | 13854 | 14921 | - | GT28 |
Gene ID: opera_contig_117272_10
Type: TC
Location: 11899 - 12534 (+)
Type: TC
Location: 11899 - 12534 (+)
Gene ID: opera_contig_117272_11
Type: TC
Location: 12478 - 13149 (-)
Type: TC
Location: 12478 - 13149 (-)
Gene ID: opera_contig_117272_12
Type: pfam
Location: 13325 - 13744 (+)
Type: pfam
Location: 13325 - 13744 (+)
Gene ID: opera_contig_117272_13
Type: CAZyme
Location: 13854 - 14921 (-)
Type: CAZyme
Location: 13854 - 14921 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus_A
Species
Coprococcus_A catus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_117272_13 | vegan > omnivore | 1.14477 | 0.01924 |