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Cluster: SPMP46_bin.66_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_117270 opera_contig_117270_90 89658 91394 + GH3
NULL(UNKNOWN) opera_contig_117270 opera_contig_117270_91 91545 92387 + NULL(UNKNOWN)
[View Structural Homologs]
pfam opera_contig_117270 opera_contig_117270_92 92668 93480 + Ubie_methyltran | TehB | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC opera_contig_117270 opera_contig_117270_93 93547 94443 + 3.A.1.5.33
TC opera_contig_117270 opera_contig_117270_94 94440 95252 + 3.A.1.5.3
TC opera_contig_117270 opera_contig_117270_95 95303 96886 + 3.A.1.5.22
TC opera_contig_117270 opera_contig_117270_96 96892 97749 + 3.A.1.5.12
TC opera_contig_117270 opera_contig_117270_97 97731 98546 + 3.A.1.5.41
Gene ID: opera_contig_117270_90
Type: CAZyme
Location: 89658 - 91394 (+)
Gene ID: opera_contig_117270_91
Type:
Location: 91545 - 92387 (+)
Gene ID: opera_contig_117270_92
Type: pfam
Location: 92668 - 93480 (+)
Gene ID: opera_contig_117270_93
Type: TC
Location: 93547 - 94443 (+)
Gene ID: opera_contig_117270_94
Type: TC
Location: 94440 - 95252 (+)
Gene ID: opera_contig_117270_95
Type: TC
Location: 95303 - 96886 (+)
Gene ID: opera_contig_117270_96
Type: TC
Location: 96892 - 97749 (+)
Gene ID: opera_contig_117270_97
Type: TC
Location: 97731 - 98546 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_117270_95 vegan > omnivore 1.66678 0.01924
opera_contig_117270_97 vegan > omnivore 1.05950 0.01924

🧭 Explore Read Mapping of CGC

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