Cluster: SPMP46_bin.66_CGC10
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP46_bin.66
- CGC Family ID: CGCFAM_07560
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_117270 | opera_contig_117270_90 | 89658 | 91394 | + | GH3 |
| NULL(UNKNOWN) | opera_contig_117270 | opera_contig_117270_91 | 91545 | 92387 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_117270 | opera_contig_117270_92 | 92668 | 93480 | + | Ubie_methyltran | TehB | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| TC | opera_contig_117270 | opera_contig_117270_93 | 93547 | 94443 | + | 3.A.1.5.33 |
| TC | opera_contig_117270 | opera_contig_117270_94 | 94440 | 95252 | + | 3.A.1.5.3 |
| TC | opera_contig_117270 | opera_contig_117270_95 | 95303 | 96886 | + | 3.A.1.5.22 |
| TC | opera_contig_117270 | opera_contig_117270_96 | 96892 | 97749 | + | 3.A.1.5.12 |
| TC | opera_contig_117270 | opera_contig_117270_97 | 97731 | 98546 | + | 3.A.1.5.41 |
Gene ID: opera_contig_117270_90
Type: CAZyme
Location: 89658 - 91394 (+)
Type: CAZyme
Location: 89658 - 91394 (+)
Gene ID: opera_contig_117270_91
Type:
Location: 91545 - 92387 (+)
Type:
Location: 91545 - 92387 (+)
Gene ID: opera_contig_117270_92
Type: pfam
Location: 92668 - 93480 (+)
Type: pfam
Location: 92668 - 93480 (+)
Gene ID: opera_contig_117270_93
Type: TC
Location: 93547 - 94443 (+)
Type: TC
Location: 93547 - 94443 (+)
Gene ID: opera_contig_117270_94
Type: TC
Location: 94440 - 95252 (+)
Type: TC
Location: 94440 - 95252 (+)
Gene ID: opera_contig_117270_95
Type: TC
Location: 95303 - 96886 (+)
Type: TC
Location: 95303 - 96886 (+)
Gene ID: opera_contig_117270_96
Type: TC
Location: 96892 - 97749 (+)
Type: TC
Location: 96892 - 97749 (+)
Gene ID: opera_contig_117270_97
Type: TC
Location: 97731 - 98546 (+)
Type: TC
Location: 97731 - 98546 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus_A
Species
Coprococcus_A catus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_117270_95 | vegan > omnivore | 1.66678 | 0.01924 |
| opera_contig_117270_97 | vegan > omnivore | 1.05950 | 0.01924 |