Cluster: SPMP46_bin.66_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP46_bin.66
- CGC Family ID: CGCFAM_07619
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_117264 | opera_contig_117264_628 | 662040 | 663851 | - | 3.A.1.120.6 |
| TC | opera_contig_117264 | opera_contig_117264_629 | 664036 | 665667 | + | 3.A.1.121.4 |
| CAZyme | opera_contig_117264 | opera_contig_117264_630 | 665828 | 666883 | + | CE4 |
| NULL(UNKNOWN) | opera_contig_117264 | opera_contig_117264_631 | 666869 | 667114 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | opera_contig_117264 | opera_contig_117264_632 | 667362 | 667943 | - | Zn_dep_PLPC |
| TC | opera_contig_117264 | opera_contig_117264_633 | 668163 | 669470 | + | 9.A.40.2.4 |
Gene ID: opera_contig_117264_628
Type: TC
Location: 662040 - 663851 (-)
Type: TC
Location: 662040 - 663851 (-)
Gene ID: opera_contig_117264_629
Type: TC
Location: 664036 - 665667 (+)
Type: TC
Location: 664036 - 665667 (+)
Gene ID: opera_contig_117264_630
Type: CAZyme
Location: 665828 - 666883 (+)
Type: CAZyme
Location: 665828 - 666883 (+)
Gene ID: opera_contig_117264_631
Type:
Location: 666869 - 667114 (-)
Type:
Location: 666869 - 667114 (-)
Gene ID: opera_contig_117264_632
Type: pfam
Location: 667362 - 667943 (-)
Type: pfam
Location: 667362 - 667943 (-)
Gene ID: opera_contig_117264_633
Type: TC
Location: 668163 - 669470 (+)
Type: TC
Location: 668163 - 669470 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus_A
Species
Coprococcus_A catus_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_117264_630 | vegan > omnivore | 1.12630 | 0.01924 |