Cluster: SPMP45_bin.31_CGC9
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: SPMP45_bin.31
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_292836 | opera_contig_292836_515 | 479844 | 481355 | - | 9.A.11.1.2 |
| pfam | opera_contig_292836 | opera_contig_292836_516 | 481667 | 482311 | + | PDDEXK_2 |
| TC | opera_contig_292836 | opera_contig_292836_517 | 482691 | 484421 | - | 3.A.1.106.2 |
| TC | opera_contig_292836 | opera_contig_292836_518 | 484424 | 486211 | - | 3.A.1.21.1 |
| TF | opera_contig_292836 | opera_contig_292836_519 | 486230 | 487159 | - | HTH_AraC |
| CAZyme | opera_contig_292836 | opera_contig_292836_520 | 487404 | 488261 | - | CE4 |
Gene ID: opera_contig_292836_515
Type: TC
Location: 479844 - 481355 (-)
Type: TC
Location: 479844 - 481355 (-)
Gene ID: opera_contig_292836_516
Type: pfam
Location: 481667 - 482311 (+)
Type: pfam
Location: 481667 - 482311 (+)
Gene ID: opera_contig_292836_517
Type: TC
Location: 482691 - 484421 (-)
Type: TC
Location: 482691 - 484421 (-)
Gene ID: opera_contig_292836_518
Type: TC
Location: 484424 - 486211 (-)
Type: TC
Location: 484424 - 486211 (-)
Gene ID: opera_contig_292836_519
Type: TF
Location: 486230 - 487159 (-)
Type: TF
Location: 486230 - 487159 (-)
Gene ID: opera_contig_292836_520
Type: CAZyme
Location: 487404 - 488261 (-)
Type: CAZyme
Location: 487404 - 488261 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Anaerostipes
Species
Anaerostipes hadrus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| opera_contig_292836_518 | vegan > omnivore | 1.05706 | 0.00246 |
| opera_contig_292836_519 | vegan > omnivore | 1.89772 | 0.00246 |
| opera_contig_292836_519 | vegetarian > omnivore | 1.28772 | 0.03972 |