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Cluster: SPMP45_bin.31_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_292837 opera_contig_292837_401 374245 374790 - CE4
CAZyme opera_contig_292837 opera_contig_292837_402 374890 376008 - CE9
TC opera_contig_292837 opera_contig_292837_403 376305 377771 - 4.A.1.1.7
TC opera_contig_292837 opera_contig_292837_404 377845 378342 - 4.A.1.2.2
Gene ID: opera_contig_292837_401
Type: CAZyme
Location: 374245 - 374790 (-)
Gene ID: opera_contig_292837_402
Type: CAZyme
Location: 374890 - 376008 (-)
Gene ID: opera_contig_292837_403
Type: TC
Location: 376305 - 377771 (-)
Gene ID: opera_contig_292837_404
Type: TC
Location: 377845 - 378342 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
opera_contig_292837_401 vegan > omnivore 1.47482 0.00246

🧭 Explore Read Mapping of CGC

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