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Cluster: SPMP40_bin.125_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_197986 opera_contig_197986_572 613434 614990 - 3.A.1.121.4
pfam opera_contig_197986 opera_contig_197986_573 615112 615579 + DUF386
pfam opera_contig_197986 opera_contig_197986_574 615999 616685 - Lactamase_B | Lactamase_B_2 | Lactamase_B_3
CAZyme opera_contig_197986 opera_contig_197986_575 616868 617848 + GH73
pfam opera_contig_197986 opera_contig_197986_576 617853 618317 + SpoU_methylase
pfam opera_contig_197986 opera_contig_197986_577 618328 618687 + PTPS
TC opera_contig_197986 opera_contig_197986_578 618687 619457 + 9.B.10.1.1
Gene ID: opera_contig_197986_572
Type: TC
Location: 613434 - 614990 (-)
Gene ID: opera_contig_197986_573
Type: pfam
Location: 615112 - 615579 (+)
Gene ID: opera_contig_197986_574
Type: pfam
Location: 615999 - 616685 (-)
Gene ID: opera_contig_197986_575
Type: CAZyme
Location: 616868 - 617848 (+)
Gene ID: opera_contig_197986_576
Type: pfam
Location: 617853 - 618317 (+)
Gene ID: opera_contig_197986_577
Type: pfam
Location: 618328 - 618687 (+)
Gene ID: opera_contig_197986_578
Type: TC
Location: 618687 - 619457 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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