Cluster: SPMP38_bin.8_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP38_bin.8
- CGC Family ID: CGCFAM_01177
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_210446 | opera_contig_210446_284 | 330437 | 331672 | - | GT30 |
| pfam | opera_contig_210446 | opera_contig_210446_285 | 331740 | 332105 | - | UPF0102 |
| CAZyme | opera_contig_210446 | opera_contig_210446_286 | 332102 | 332683 | - | GT90 |
| NULL(UNKNOWN) | opera_contig_210446 | opera_contig_210446_287 | 332656 | 333120 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | opera_contig_210446 | opera_contig_210446_288 | 333173 | 333874 | - | S51.001 |
| TC | opera_contig_210446 | opera_contig_210446_289 | 334040 | 334276 | + | 3.D.1.6.4 |
Gene ID: opera_contig_210446_284
Type: CAZyme
Location: 330437 - 331672 (-)
Type: CAZyme
Location: 330437 - 331672 (-)
Gene ID: opera_contig_210446_285
Type: pfam
Location: 331740 - 332105 (-)
Type: pfam
Location: 331740 - 332105 (-)
Gene ID: opera_contig_210446_286
Type: CAZyme
Location: 332102 - 332683 (-)
Type: CAZyme
Location: 332102 - 332683 (-)
Gene ID: opera_contig_210446_287
Type:
Location: 332656 - 333120 (-)
Type:
Location: 332656 - 333120 (-)
Gene ID: opera_contig_210446_288
Type: peptidase
Location: 333173 - 333874 (-)
Type: peptidase
Location: 333173 - 333874 (-)
Gene ID: opera_contig_210446_289
Type: TC
Location: 334040 - 334276 (+)
Type: TC
Location: 334040 - 334276 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes putredinis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.