Cluster: SPMP38_bin.8_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: SPMP38_bin.8
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_210444 | opera_contig_210444_98 | 115567 | 116286 | - | GT2 |
| CAZyme | opera_contig_210444 | opera_contig_210444_99 | 116540 | 117532 | - | GT27 |
| pfam | opera_contig_210444 | opera_contig_210444_100 | 117532 | 118500 | - | Lip_A_acyltrans |
| TC | opera_contig_210444 | opera_contig_210444_101 | 118493 | 119881 | - | 9.B.145.1.2 |
Gene ID: opera_contig_210444_98
Type: CAZyme
Location: 115567 - 116286 (-)
Type: CAZyme
Location: 115567 - 116286 (-)
Gene ID: opera_contig_210444_99
Type: CAZyme
Location: 116540 - 117532 (-)
Type: CAZyme
Location: 116540 - 117532 (-)
Gene ID: opera_contig_210444_100
Type: pfam
Location: 117532 - 118500 (-)
Type: pfam
Location: 117532 - 118500 (-)
Gene ID: opera_contig_210444_101
Type: TC
Location: 118493 - 119881 (-)
Type: TC
Location: 118493 - 119881 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes putredinis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.