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Cluster: SPMP36_bin.17_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC opera_contig_18 opera_contig_18_12 14871 17321 - 4.A.1.1.8
TF opera_contig_18 opera_contig_18_13 17551 18270 + GntR
TC opera_contig_18 opera_contig_18_14 18577 19893 + 3.A.1.1.45
TC opera_contig_18 opera_contig_18_15 19981 20835 + 3.A.1.1.45
TC opera_contig_18 opera_contig_18_16 20835 21674 + 3.A.1.1.45
TC opera_contig_18 opera_contig_18_17 21743 22942 + 3.A.1.1.22
CAZyme opera_contig_18 opera_contig_18_18 23398 25665 - GT35
CAZyme opera_contig_18 opera_contig_18_19 25795 27300 - GH77
Gene ID: opera_contig_18_12
Type: TC
Location: 14871 - 17321 (-)
Gene ID: opera_contig_18_13
Type: TF
Location: 17551 - 18270 (+)
Gene ID: opera_contig_18_14
Type: TC
Location: 18577 - 19893 (+)
Gene ID: opera_contig_18_15
Type: TC
Location: 19981 - 20835 (+)
Gene ID: opera_contig_18_16
Type: TC
Location: 20835 - 21674 (+)
Gene ID: opera_contig_18_17
Type: TC
Location: 21743 - 22942 (+)
Gene ID: opera_contig_18_18
Type: CAZyme
Location: 23398 - 25665 (-)
Gene ID: opera_contig_18_19
Type: CAZyme
Location: 25795 - 27300 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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