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Cluster: SPMP36_bin.17_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_1 opera_contig_1_189 207565 208491 - CE7
TC opera_contig_1 opera_contig_1_190 208623 209450 - 3.A.1.5.27
TC opera_contig_1 opera_contig_1_191 209451 211466 - 3.A.1.5.25
TC opera_contig_1 opera_contig_1_192 211470 212426 - 3.A.1.5.38
TC opera_contig_1 opera_contig_1_193 212584 214197 - 3.A.1.5.27
pfam opera_contig_1 opera_contig_1_194 214563 216503 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC opera_contig_1 opera_contig_1_195 216510 218192 - 2.A.66.4.4
Gene ID: opera_contig_1_189
Type: CAZyme
Location: 207565 - 208491 (-)
Gene ID: opera_contig_1_190
Type: TC
Location: 208623 - 209450 (-)
Gene ID: opera_contig_1_191
Type: TC
Location: 209451 - 211466 (-)
Gene ID: opera_contig_1_192
Type: TC
Location: 211470 - 212426 (-)
Gene ID: opera_contig_1_193
Type: TC
Location: 212584 - 214197 (-)
Gene ID: opera_contig_1_194
Type: pfam
Location: 214563 - 216503 (-)
Gene ID: opera_contig_1_195
Type: TC
Location: 216510 - 218192 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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