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Cluster: SPMP36_bin.17_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme opera_contig_1 opera_contig_1_170 183900 185633 - GH13_30
STP opera_contig_1 opera_contig_1_171 186377 187123 - STAS
STP opera_contig_1 opera_contig_1_172 187202 189547 - GAF | SpoIIE
TC opera_contig_1 opera_contig_1_173 190291 191319 - 3.A.1.5.36
TC opera_contig_1 opera_contig_1_174 191319 192410 - 3.A.1.5.34
TC opera_contig_1 opera_contig_1_175 192413 193348 - 3.A.1.5.11
TC opera_contig_1 opera_contig_1_176 193363 194400 - 3.A.1.5.37
TC opera_contig_1 opera_contig_1_177 194557 196233 - 3.A.1.5.35
Gene ID: opera_contig_1_170
Type: CAZyme
Location: 183900 - 185633 (-)
Gene ID: opera_contig_1_171
Type: STP
Location: 186377 - 187123 (-)
Gene ID: opera_contig_1_172
Type: STP
Location: 187202 - 189547 (-)
Gene ID: opera_contig_1_173
Type: TC
Location: 190291 - 191319 (-)
Gene ID: opera_contig_1_174
Type: TC
Location: 191319 - 192410 (-)
Gene ID: opera_contig_1_175
Type: TC
Location: 192413 - 193348 (-)
Gene ID: opera_contig_1_176
Type: TC
Location: 193363 - 194400 (-)
Gene ID: opera_contig_1_177
Type: TC
Location: 194557 - 196233 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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