Cluster: SPMP34_bin.59_CGC6
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 4
- Substrate:
- Genome ID: SPMP34_bin.59
- CGC Family ID: CGCFAM_00162
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_107531 | opera_contig_107531_247 | 269636 | 270649 | - | 9.B.97.1.2 |
| TC | opera_contig_107531 | opera_contig_107531_248 | 270706 | 271371 | - | 9.B.143.2.3 |
| TF | opera_contig_107531 | opera_contig_107531_249 | 271368 | 272306 | - | HTH_1 |
| NULL(UNKNOWN) | opera_contig_107531 | opera_contig_107531_250 | 272420 | 272665 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | opera_contig_107531 | opera_contig_107531_251 | 272762 | 274408 | - | CBM91 | GH43_11 |
| CAZyme | opera_contig_107531 | opera_contig_107531_252 | 274424 | 275767 | - | GH30_1 |
| CAZyme | opera_contig_107531 | opera_contig_107531_253 | 275782 | 277782 | - | GH42 |
| TC | opera_contig_107531 | opera_contig_107531_254 | 277843 | 279231 | - | 2.A.2.3.3 |
| CAZyme | opera_contig_107531 | opera_contig_107531_255 | 279262 | 280431 | - | GH5_44 |
Gene ID: opera_contig_107531_247
Type: TC
Location: 269636 - 270649 (-)
Type: TC
Location: 269636 - 270649 (-)
Gene ID: opera_contig_107531_248
Type: TC
Location: 270706 - 271371 (-)
Type: TC
Location: 270706 - 271371 (-)
Gene ID: opera_contig_107531_249
Type: TF
Location: 271368 - 272306 (-)
Type: TF
Location: 271368 - 272306 (-)
Gene ID: opera_contig_107531_250
Type:
Location: 272420 - 272665 (+)
Type:
Location: 272420 - 272665 (+)
Gene ID: opera_contig_107531_251
Type: CAZyme
Location: 272762 - 274408 (-)
Type: CAZyme
Location: 272762 - 274408 (-)
Gene ID: opera_contig_107531_252
Type: CAZyme
Location: 274424 - 275767 (-)
Type: CAZyme
Location: 274424 - 275767 (-)
Gene ID: opera_contig_107531_253
Type: CAZyme
Location: 275782 - 277782 (-)
Type: CAZyme
Location: 275782 - 277782 (-)
Gene ID: opera_contig_107531_254
Type: TC
Location: 277843 - 279231 (-)
Type: TC
Location: 277843 - 279231 (-)
Gene ID: opera_contig_107531_255
Type: CAZyme
Location: 279262 - 280431 (-)
Type: CAZyme
Location: 279262 - 280431 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.