Cluster: SPMP34_bin.59_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP34_bin.59
- CGC Family ID: CGCFAM_01563
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | opera_contig_107531 | opera_contig_107531_96 | 103086 | 105419 | - | GH146 |
| pfam | opera_contig_107531 | opera_contig_107531_97 | 105437 | 106054 | - | Flavodoxin_2 | FMN_red |
| TC | opera_contig_107531 | opera_contig_107531_98 | 106187 | 107014 | - | 3.A.1.1.36 |
| TC | opera_contig_107531 | opera_contig_107531_99 | 107029 | 107961 | - | 3.A.1.1.11 |
| TC | opera_contig_107531 | opera_contig_107531_100 | 107990 | 109264 | - | 3.A.1.1.40 |
| CAZyme | opera_contig_107531 | opera_contig_107531_101 | 109338 | 110651 | - | GH177 |
| CAZyme | opera_contig_107531 | opera_contig_107531_102 | 110946 | 112832 | - | GH129 |
Gene ID: opera_contig_107531_96
Type: CAZyme
Location: 103086 - 105419 (-)
Type: CAZyme
Location: 103086 - 105419 (-)
Gene ID: opera_contig_107531_97
Type: pfam
Location: 105437 - 106054 (-)
Type: pfam
Location: 105437 - 106054 (-)
Gene ID: opera_contig_107531_98
Type: TC
Location: 106187 - 107014 (-)
Type: TC
Location: 106187 - 107014 (-)
Gene ID: opera_contig_107531_99
Type: TC
Location: 107029 - 107961 (-)
Type: TC
Location: 107029 - 107961 (-)
Gene ID: opera_contig_107531_100
Type: TC
Location: 107990 - 109264 (-)
Type: TC
Location: 107990 - 109264 (-)
Gene ID: opera_contig_107531_101
Type: CAZyme
Location: 109338 - 110651 (-)
Type: CAZyme
Location: 109338 - 110651 (-)
Gene ID: opera_contig_107531_102
Type: CAZyme
Location: 110946 - 112832 (-)
Type: CAZyme
Location: 110946 - 112832 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.