Cluster: SPMP34_bin.59_CGC18
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: SPMP34_bin.59
- Continent: Asia
- Source Study: Gounot et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | opera_contig_107534 | opera_contig_107534_203 | 223526 | 224299 | + | 3.A.1.17.8 |
| TC | opera_contig_107534 | opera_contig_107534_204 | 224300 | 225301 | + | 3.A.1.17.8 |
| TC | opera_contig_107534 | opera_contig_107534_205 | 225314 | 226063 | + | 3.A.1.17.8 |
| CAZyme | opera_contig_107534 | opera_contig_107534_206 | 226347 | 227789 | + | CE4 |
| TF | opera_contig_107534 | opera_contig_107534_207 | 227858 | 228583 | - | GntR |
| TC | opera_contig_107534 | opera_contig_107534_208 | 228750 | 230729 | + | 4.A.1.2.13 |
| CAZyme | opera_contig_107534 | opera_contig_107534_209 | 230744 | 232417 | + | GH13_29 |
| CAZyme | opera_contig_107534 | opera_contig_107534_210 | 232550 | 234589 | - | GH13_20 |
Gene ID: opera_contig_107534_203
Type: TC
Location: 223526 - 224299 (+)
Type: TC
Location: 223526 - 224299 (+)
Gene ID: opera_contig_107534_204
Type: TC
Location: 224300 - 225301 (+)
Type: TC
Location: 224300 - 225301 (+)
Gene ID: opera_contig_107534_205
Type: TC
Location: 225314 - 226063 (+)
Type: TC
Location: 225314 - 226063 (+)
Gene ID: opera_contig_107534_206
Type: CAZyme
Location: 226347 - 227789 (+)
Type: CAZyme
Location: 226347 - 227789 (+)
Gene ID: opera_contig_107534_207
Type: TF
Location: 227858 - 228583 (-)
Type: TF
Location: 227858 - 228583 (-)
Gene ID: opera_contig_107534_208
Type: TC
Location: 228750 - 230729 (+)
Type: TC
Location: 228750 - 230729 (+)
Gene ID: opera_contig_107534_209
Type: CAZyme
Location: 230744 - 232417 (+)
Type: CAZyme
Location: 230744 - 232417 (+)
Gene ID: opera_contig_107534_210
Type: CAZyme
Location: 232550 - 234589 (-)
Type: CAZyme
Location: 232550 - 234589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Sellimonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.